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tutorial: Commit

This repository is for tutorials of Eos.


Commit MetaInfo

Revision37d9d4701d545e4dffef1f876bb414c7979c6fb5 (tree)
Time2014-09-22 10:30:13
Authorkinoshita-eos <kinoshita@yasu...>
Commiterkinoshita-eos

Log Message

Bug fixed: for CTFCorrection5
modified: CTFCorrection/CTFCorrection3/Makefile.config
modified: CTFCorrection/CTFCorrection5/Makefile
modified: TIPS/LoopCommand/Makefile.config

Change Summary

Incremental Difference

--- a/CTFCorrection/CTFCorrection3/Makefile.config
+++ b/CTFCorrection/CTFCorrection3/Makefile.config
@@ -51,10 +51,10 @@ TIF2CTF2::
5151 # make CTFS;
5252
5353 ImageAverage::
54- touch CTF_LIST;
55- rm CTF_LIST;
56- ls -1 *.ctf >> CTF_LIST;
57- mrcImageAverage -i CTF_LIST -o $(INPUT).avg;
54+ touch CTF.list;
55+ rm CTF.list;
56+ ls -1 *.ctf >> CTF.list;
57+ mrcImageAverage -i CTF.list -o $(INPUT).avg;
5858 mrc2tiff -i $(INPUT).avg -o $(INPUT)_avg.tiff;
5959
6060 ##### Commands(Input to Output) #####
--- a/CTFCorrection/CTFCorrection5/Makefile
+++ b/CTFCorrection/CTFCorrection5/Makefile
@@ -51,12 +51,27 @@ JOP_NUM=-j 3
5151
5252
5353 ##### Commands #####
54+all3::
55+ make InitialCTFDataFromMRC;
56+ make ProcessForInput;
57+ make ProcessForInput2;
58+ make TIF2CTF2;
59+ make ImageAverage
60+
61+all3S::
62+ make InitialSiemensStar;
63+ make ProcessForInput;
64+ make ProcessForInput2;
65+ make TIF2CTF2;
66+ make ImageAverage
67+
5468 all5::
5569 make InitialCTFDataFromMRC;
5670 make ProcessForInput;
5771 make ProcessForInput2;
5872 make TIF2CTF2;
5973 make MULTICTF;
74+ make CTF2TIFF;
6075
6176 all5S::
6277 make InitialSiemensStar;
@@ -64,6 +79,7 @@ all5S::
6479 make ProcessForInput2;
6580 make TIF2CTF2;
6681 make MULTICTF;
82+ make CTF2TIFF;
6783
6884 ##### Commands(Input to Output) #####
6985
--- a/TIPS/LoopCommand/Makefile.config
+++ b/TIPS/LoopCommand/Makefile.config
@@ -61,6 +61,7 @@ LoopCommandEachFile::
6161
6262 InputList::
6363 touch $(INPUT_EXT).$(LIST_EXT)
64+ rm $(INPUT_EXT).$(LIST_EXT)
6465 ls -1 *.$(INPUT_EXT) >> $(INPUT_EXT).$(LIST_EXT)
6566
6667 LoopCommandHelp::
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