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Project Description

Py_ContigViewer is a contig viewer, a stand alone
cross-platform desktop application that uses CAP3
alignments to graphically display and validate
candidate SNPs and InDels. It also simplifies PCR
oligo design in an interactive mode. The extended
mode provides the display of BLAST hits of
annotated sequences with intron positions for the
selected contig. Py_ContigViewer works in
conjunction with DIS (Deletion, Insertion,
Substitution) SNP discovery pipeline at
http://www.atgc.org/SNP_Discovery/.

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2004-04-20 05:23 Back to release list
Apr_19_2004

This release provides transparent data transfer to the PerlPrimer program via a network socket. It simplifies oligo design because there is no longer a need to run "save as" / "open as" dialogs. It also allows configuration of display parameters using a config file.
Tags: Minor feature enhancements

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